Information for 18-CWAAKCTMRGCTC (Motif 28)

A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G G T A C A G C T A C G T C G T A A C T G G T C A A C G T A C G T C G T A A C T G
p-value:1e-7
log p-value:-1.763e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 16.8bp
Average Position of motif in Background60.2 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CWAAKCTMRGCTC
-AAATCACAGCA-
 A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CWAAKCTMRGCTC
-AAATCACTGC--
 A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CWAAKCTMRGCTC
CAAATCACTG---
 A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CWAAKCTMRGCTC
GCTAATCC------
 A C G T A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:CWAAKCTMRGCTC
--------NGCTN
 A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CWAAKCTMRGCTC
YTAATCCY-----
 A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CWAAKCTMRGCTC
NNTAATCCNGNCNN
 A C G T A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CWAAKCTMRGCTC--
---------GCTCCG
 A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CWAAKCTMRGCTC
CTTAATCCC-----
 A C G T A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CWAAKCTMRGCTC
--AAGCTTG----
 A G T C C G A T C G T A C G T A A C G T A G T C A C G T G T C A C T G A A C T G A G T C A C G T A G T C
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T