Information for 17-AAAGGCDGGCTTTGTT (Motif 24)

G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T
Reverse Opposite:
C G T A G T C A A T G C C G T A G T C A C G T A A C T G G T A C A G T C G T A C A C T G A T G C G T A C A C G T A C G T C A G T
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.773
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.6 +/- 29.7bp
Average Position of motif in Background36.6 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.61
Offset:8
Orientation:forward strand
Alignment:AAAGGCDGGCTTTGTT--
--------YCTTTGTTCC
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.58
Offset:9
Orientation:forward strand
Alignment:AAAGGCDGGCTTTGTT
---------CTTTGT-
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.58
Offset:8
Orientation:forward strand
Alignment:AAAGGCDGGCTTTGTT--
--------CCWTTGTYYB
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAAGGCDGGCTTTGTT-----
----TNNTCCTTTGTTCTNNT
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.57
Offset:8
Orientation:forward strand
Alignment:AAAGGCDGGCTTTGTT--
--------CCTTTGTTTT
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAAGGCDGGCTTTGTT-----
----NNNTCCTTTGTTCTNNN
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:8
Orientation:forward strand
Alignment:AAAGGCDGGCTTTGTT--
--------GCTGTGGTTT
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AAAGGCDGGCTTTGTT
--------CCWTTGTY
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAAGGCDGGCTTTGTT
---AGGVNCCTTTGT-
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T
A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AAAGGCDGGCTTTGTT
-AACACTACCATTGTT
 G T C A C G T A C G T A A C T G A T C G G T A C C A G T C T A G A C T G A G T C A C G T A C G T A C G T A T C G C A G T A C G T
A C G T T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T