Information for 10-TYAAAKTSCTWCA (Motif 15)

A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A C G T A A C T G A T C G C G T A G T C A A C G T A C G T A C G T T C A G C G T A
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.859
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 27.2bp
Average Position of motif in Background60.7 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0116.1_Nkx2-9/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TYAAAKTSCTWCA---
TTTTAAGTACTTAAATT
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0112.1_Nkx2-3/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TYAAAKTSCTWCA--
CTTTAAGTACTTAATG
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TYAAAKTSCTWCA---
TACTAAGTACTTAAATG
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TYAAAKTSCTWCA
GGGGTCAAAGTCCAAT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TYAAAKTSCTWCA
--GCATTCCAGN-
 A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TYAAAKTSCTWCA
ATTAAA--------
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TYAAAKTSCTWCA--
-----TTGCAACATN
 A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TYAAAKTSCTWCA
-CACATTCCAT--
 A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TYAAAKTSCTWCA-
ATGGAAAGTCGTAAAA
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TYAAAKTSCTWCA-
----ATTGCATCAK
 A C G T A G T C C G T A C G T A C G T A A C G T A C G T T A G C A G T C A C G T C G A T A T G C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T