Information for 4-AGKGGTSACAKTW (Motif 7)

C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A G T C A A C G T A C T G C G A T A T C G C G T A A G T C A G T C G T A C G T A C A C G T
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.2 +/- 18.4bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AGKGGTSACAKTW
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGKGGTSACAKTW
AGRGGTCA-----
 C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AGKGGTSACAKTW
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGKGGTSACAKTW
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGKGGTSACAKTW
GGTGYTGACAGS-
 C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGKGGTSACAKTW--
TNNNNGGTGTCATNTNT
 A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGKGGTSACAKTW
AGGTGTGA-----
 C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGKGGTSACAKTW----
-GGGGTCAAAGTCCAAT
 C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGKGGTSACAKTW
--AGGTCA-----
 C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGKGGTSACAKTW
TCTCAAAGGTCACCTG-
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C T G A C G T A T G C C G T A A G T C C G T A A C G T A C G T C G T A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T