Information for 12-TGCCAGCCCTTGC (Motif 27)

A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A C T G A A C T G A C T G A C T G A G T C A C G T A C T G A C T G A T G C C T G A
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.861
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.2 +/- 28.5bp
Average Position of motif in Background43.0 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCCAGCCCTTGC
--BNTGDCCTTG-
 A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCCAGCCCTTGC
--CNAGGCCT---
 A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGCCAGCCCTTGC------
---GAGCCCTTGTCCCTAA
 A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCCAGCCCTTGC
ATGCCAACC-----
 A C G T A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCCAGCCCTTGC-
----TGACCTTGAN
 A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGCCAGCCCTTGC
---CAGCC-----
 A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGCCAGCCCTTGC-
----ACCACTTGAA
 A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGCCAGCCCTTGC-
-----CCACTTGAA
 A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TGCCAGCCCTTGC-
------CCTTTGTT
 A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGCCAGCCCTTGC--
---SNGCACCTGCHS
 A G C T A T C G A G T C G T A C C G T A A C T G A G T C G T A C G T A C A G C T A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C