Information for 9-GCTGAGAGGGCTCTGT (Motif 20)

A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T
Reverse Opposite:
C G T A A G T C C G T A C T A G G T C A A T C G A G T C A G T C A G T C A C G T A G T C A C G T A T G C C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.272e+01
Information Content per bp:1.822
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.4 +/- 14.7bp
Average Position of motif in Background44.2 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCTGAGAGGGCTCTGT
----AGGVNCCTTTGT
 A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T
A C G T A C G T A C G T A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGAGGGCTCTGT
GGTGYTGACAGS-------
 A C G T A C G T A C G T A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGAGGGCTCTGT
AGGGGTCAGAGGTCA----
 A C G T A C G T A C G T A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----GCTGAGAGGGCTCTGT
NANAGATCAAAGGGNNN---
 A C G T A C G T A C G T A C G T A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGAGGGCTCTGT
TGCCCTNAGGGCA----
 A C G T A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:6
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GCTGAGAGGGCTCTGT---
-CAAAAAGGGGCGTGGCAT
 A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.48
Offset:-7
Orientation:reverse strand
Alignment:-------GCTGAGAGGGCTCTGT
NAAAANTGCTGACTCAGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----GCTGAGAGGGCTCTGT
AATTTGCTGAC----------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GCTGAGAGGGCTCTGT-
-NTNTGGGGGGTCNNNA
 A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T A C G T
A C G T G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:10
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGAGGGCTCTGT-
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C T G A G T C C G A T T A C G C G T A T C A G C G T A A C T G C T A G A C T G A T G C A C G T A G T C C G A T C T A G A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G