Information for 8-AGRKGSCTGGWGGARA (Motif 13)

C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
Reverse Opposite:
C G A T G A T C C A G T A G T C A G T C C G T A A G T C G T A C G T C A C A T G A T G C A G T C G T A C A G C T A G T C G C A T
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.604
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif113.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets47.2 +/- 21.1bp
Average Position of motif in Background47.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGRKGSCTGGWGGARA
--AGGCCTNG------
 C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGRKGSCTGGWGGARA
NNTNNTGTCTGGNNTNG-
 A C G T A C G T C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGRKGSCTGGWGGARA
--AGGCCTAG------
 C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGRKGSCTGGWGGARA
--TWGTCTGV------
 C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGRKGSCTGGWGGARA-------
---NNCCTGNAAAAAAAAAAAAA
 C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGRKGSCTGGWGGARA
---GGTCTGGCAT---
 C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGRKGSCTGGWGGARA
--CTGTCTGG------
 C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGRKGSCTGGWGGARA
---GGGCGGGAAGG--
 C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGRKGSCTGGWGGARA
---TGCCCNGGGGCA-
 C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGRKGSCTGGWGGARA
---TGTCAGGGGGCG-
 C G T A T C A G T C G A C A T G T A C G T A C G G T A C A C G T A C T G T C A G G C A T C T A G T C A G G T C A C T A G G C T A
A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T