p-value: | 1e-6 |
log p-value: | -1.426e+01 |
Information Content per bp: | 1.879 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.41% |
Number of Background Sequences with motif | 1.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 66.0 +/- 12.1bp |
Average Position of motif in Background | 29.2 +/- 3.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | KGGCTWAKCCCTS --GCTAATCC--- |
|
|
|
PH0139.1_Pitx3/Jaspar
Match Rank: | 2 |
Score: | 0.67 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --KGGCTWAKCCCTS- GNNAGCTAATCCCCCN |
|
|
|
GSC/MA0648.1/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | KGGCTWAKCCCTS --GCTAATCCCC- |
|
|
|
PH0015.1_Crx/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | KGGCTWAKCCCTS--- AGGCTAATCCCCAANG |
|
|
|
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 5 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | KGGCTWAKCCCTS --NYTAATCCYB- |
|
|
|
PITX3/MA0714.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | KGGCTWAKCCCTS --CTTAATCCC-- |
|
|
|
PH0137.1_Pitx1/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -KGGCTWAKCCCTS--- NTTGTTAATCCCTCTNN |
|
|
|
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | KGGCTWAKCCCTS ----TAATCCCN- |
|
|
|
PH0035.1_Gsc/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --KGGCTWAKCCCTS-- AATCGTTAATCCCTTTA |
|
|
|
RHOXF1/MA0719.1/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | KGGCTWAKCCCTS ---ATAATCCC-- |
|
|
|