p-value: | 1e-9 |
log p-value: | -2.190e+01 |
Information Content per bp: | 1.701 |
Number of Target Sequences with motif | 13.0 |
Percentage of Target Sequences with motif | 1.80% |
Number of Background Sequences with motif | 73.0 |
Percentage of Background Sequences with motif | 0.16% |
Average Position of motif in Targets | 50.2 +/- 26.2bp |
Average Position of motif in Background | 43.4 +/- 28.8bp |
Strand Bias (log2 ratio + to - strand density) | 1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
Match Rank: | 1 |
Score: | 0.62 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CAGCCCCCTGTVAATC-- ------NCTGTCAATCAN |
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Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | CAGCCCCCTGTVAATC-- ------SCTGTCAVTCAV |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 3 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CAGCCCCCTGTVAATC- -----GSCTGTCACTCA |
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PH0140.1_Pknox1/Jaspar
Match Rank: | 4 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CAGCCCCCTGTVAATC- -AAAGACCTGTCAATCC |
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Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------CAGCCCCCTGTVAATC ANTTMRCASBNNNGTGYKAAN- |
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INSM1/MA0155.1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CAGCCCCCTGTVAATC -CGCCCCCTGACA--- |
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PH0141.1_Pknox2/Jaspar
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CAGCCCCCTGTVAATC- -AAGCACCTGTCAATAT |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 8 |
Score: | 0.52 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CAGCCCCCTGTVAATC CACAGN------------ |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | CAGCCCCCTGTVAATC ------GCTGTCAA-- |
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REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAGCCCCCTGTVAATC--- TCAGCACCATGGACAGCTCC |
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