Information for 13-TTTTACTGGGAAT (Motif 24)

A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
Reverse Opposite:
G T C A A C G T A G C T T A G C A G T C A G T C C G T A A C T G A C G T C G T A C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 21.6bp
Average Position of motif in Background45.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTTTACTGGGAAT
TTTTATKRGG---
 A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTACTGGGAAT
NTTTTATTGG----
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTTACTGGGAAT
TTTTTATTGG----
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTTACTGGGAAT
NTTTTATTGG----
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTTACTGGGAAT
NNANTTTTATTGGNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TTTTACTGGGAAT
--CTTCTGGGAAA
 A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTTACTGGGAAT
NNAATTTTATTGGNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTACTGGGAAT
TTTTATTRGN---
 A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTTACTGGGAAT
TTTAATTGCN---
 A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTTACTGGGAAT
--WDNCTGGGCA-
 A C G T A C G T A C G T A C G T C G T A G T A C A C G T A C T G A C T G A C T G C T G A C G T A A C G T
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T