Information for 12-ATCAAGACAGTGG (Motif 23)

C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G
Reverse Opposite:
G T A C G T A C C G T A G T A C A C G T A C T G A C G T A G T C C G A T A C G T A C T G C G T A A C G T
p-value:1e-9
log p-value:-2.212e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.8 +/- 34.6bp
Average Position of motif in Background41.5 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATCAAGACAGTGG
---AAAACAATGG
 C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATCAAGACAGTGG-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATCAAGACAGTGG-
CAAATCCAGACATCACA
 A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ATCAAGACAGTGG
---VRAACAATGG
 C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G
A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATCAAGACAGTGG
--CCAGACAG---
 C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ATCAAGACAGTGG-
----RAACAATGGN
 C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATCAAGACAGTGG
CGTCTAGACA----
 A C G T C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ATCAAGACAGTGG-
-----GACAATGNN
 C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ATCAAGACAGTGG
---TTGACAG---
 C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATCAAGACAGTGG-
----TGGCAGTTGN
 C G T A A C G T A G T C C G T A C G T A A C T G C G T A A G T C G T C A A C T G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G