Information for 15-CGCAAACCAA (Motif 20)

A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A C G T A C G T C G A T C T A G A G T C C T A G
p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.863
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets60.1 +/- 23.8bp
Average Position of motif in Background47.0 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCAAACCAA----
AAAGTAAACAAAAATT
 A C G T A C G T A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCAAACCAA----
ATATCAAAACAAAACA
 A C G T A C G T A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

RREB1/MA0073.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCAAACCAA---------
CCCCAAACCACCCCCCCCCA
 A C G T A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCAAACCAA---
---AAACCACANN
 A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGCAAACCAA--
--NAAACCACAG
 A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T A C G T
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGCAAACCAA-
CAAAAGTAAACAAAG
 A C G T A C G T A C G T A C G T A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCAAACCAA----
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCAAACCAA---
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCAAACCAA---
AAAATGTAAACAAACAG
 A C G T A C G T A C G T A C G T A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

Foxj3/MA0851.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCAAACCAA---
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A G T C T C A G A G T C C G T A C G T A C G T A G T A C A G T C G T C A C G T A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C