p-value: | 1e-11 |
log p-value: | -2.557e+01 |
Information Content per bp: | 1.715 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.69% |
Number of Background Sequences with motif | 0.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 64.8 +/- 6.1bp |
Average Position of motif in Background | 7.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
ISL2/MA0914.1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCGTGTTTAGTGC -----TTAAGTGC |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCGTGTTTAGTGC-- -----TTAAGTGCTT |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCGTGTTTAGTGC- -----TTAAGTGGN |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CCGTGTTTAGTGC -----CTAATKGV |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCGTGTTTAGTGC-- -----TTGAGTGSTT |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CCGTGTTTAGTGC- -----TTAAGTGGT |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CCGTGTTTAGTGC- ----BTBRAGTGSN |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CCGTGTTTAGTGC-- -----TTRAGTGSYK |
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PH0004.1_Nkx3-2/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCGTGTTTAGTGC----- -NTNNTTAAGTGGTTANN |
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Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CCGTGTTTAGTGC-- ----CTTGAGTGGCT |
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