p-value: | 1e-13 |
log p-value: | -3.171e+01 |
Information Content per bp: | 1.584 |
Number of Target Sequences with motif | 47.0 |
Percentage of Target Sequences with motif | 6.39% |
Number of Background Sequences with motif | 784.2 |
Percentage of Background Sequences with motif | 1.67% |
Average Position of motif in Targets | 41.7 +/- 26.6bp |
Average Position of motif in Background | 48.5 +/- 29.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.4 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | CAATCACMCAGACAGA -------CCAGACAG- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CAATCACMCAGACAGA--- --CAAATCCAGACATCACA |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.56 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | CAATCACMCAGACAGA- -------CCAGACRSVB |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | CAATCACMCAGACAGA -------BCAGACWA- |
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Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CAATCACMCAGACAGA ----CRCCCACGCA-- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 6 |
Score: | 0.50 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CAATCACMCAGACAGA --AGGTGNCAGACAG- |
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PB0166.1_Sox12_2/Jaspar
Match Rank: | 7 |
Score: | 0.50 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | CAATCACMCAGACAGA----- -----AAACAGACAAAGGAAT |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 8 |
Score: | 0.50 |
Offset: | 10 |
Orientation: | reverse strand |
Alignment: | CAATCACMCAGACAGA ----------CACAGN |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | CAATCACMCAGACAGA-- --------ATGCCAGACN |
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Dux/MA0611.1/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CAATCACMCAGACAGA CCAATCAA--------- |
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