Information for 15-GAAAATCTCTTAT (Motif 18)

A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T
Reverse Opposite:
C G T A A C G T G T C A C G T A A C T G C G T A A C T G C G T A A C G T C G A T A C G T A C G T A G T C
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 21.7bp
Average Position of motif in Background20.0 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAAATCTCTTAT--
-AAAAACCATTAAGG
 A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T A C G T A C G T
A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAAATCTCTTAT
-CAAATCACTG--
 A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAAATCTCTTAT
GGAAATTCCC----
 A C G T A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAAAATCTCTTAT
--TAATCAATTA-
 A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T
A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAAAATCTCTTAT
AAAAAATCAATAAT
 A C G T A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

PB0021.1_Gata3_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAAAATCTCTTAT---------
NNTNANTTCTTATCTCTANANN
 A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAAAATCTCTTAT
GGAAATTCCC----
 A C G T A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:GAAAATCTCTTAT----
-------YCTTATCTBN
 A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAAAATCTCTTAT
AAAAAATCGATAAT
 A C G T A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

PAX7/MA0680.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAAAATCTCTTAT
--TAATCGATTA-
 A C T G C G T A C G T A C G T A G T C A A C G T G T A C A C G T A G T C A C G T A C G T C G T A C G A T
A C G T A C G T C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A A C G T