Information for 9-GCTGTCACTGGTG (Motif 10)

A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G
Reverse Opposite:
A T G C C G T A A G T C A G T C C G T A A C T G A C G T A T C G C G T A A G T C C G T A A T C G A G T C
p-value:1e-11
log p-value:-2.559e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 22.8bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCTGTCACTGGTG
VGCTGWCAVB----
 A C G T A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTGTCACTGGTG----
-CAATCACTGGCAGAAT
 A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCTGTCACTGGTG----
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGTCACTGGTG
NNNCAGCTGTCAATATN-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTGTCACTGGTG-----
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTGTCACTGGTG
GCTGTCAA-----
 A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTGTCACTGGTG
CCTGTCAA-----
 A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTCACTGGTG
AAGCACCTGTCAATAT--
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTCACTGGTG
AGGACGCTGTAAAGGGA-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTCACTGGTG
ARNTGACA------
 A C G T A C T G A T G C A C G T A C T G C G A T A T G C C G T A A G T C A C G T A C T G A C T G A C G T A T C G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T