Information for 7-CAAAAATTTGCTA (Motif 9)

A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A
Reverse Opposite:
A G C T C G T A C A T G A G T C G C T A C G T A T C G A C G A T G C A T A G C T C G A T C A G T C T A G
p-value:1e-9
log p-value:-2.090e+01
Information Content per bp:1.672
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif151.7
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets52.1 +/- 28.5bp
Average Position of motif in Background54.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAAAAATTTGCTA--
GAAAAAATTGCAAGG
 A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CAAAAATTTGCTA
CAATTGCAAAAATAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAAAAATTTGCTA---------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAAAAATTTGCTA-------
---AAATTTGCTGACTTAGA
 A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAAAAATTTGCTA-----
---NNCGTTGCTATGGNN
 A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAAAAATTTGCTA-----
---AAAWWTGCTGACWWD
 A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

PB0197.1_Zfp105_2/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CAAAAATTTGCTA
ATGGTTCAATAATTTTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAAAAATTTGCTA---
----CTGTTGCTAGGS
 A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAAAAATTTGCTA-----
---NCCGTTGCTANGNGN
 A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

MAFF/MA0495.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAAAAATTTGCTA-------
--NAAAANTGCTGACTCAGC
 A G T C G T C A G C T A T C G A C G T A G C T A A G C T A C G T C A G T C T A G G A T C C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C