Information for 5-GTGGCGCCAC (Motif 5)

A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C
p-value:1e-13
log p-value:-3.064e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.5 +/- 17.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCGCCAC---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GTGGCGCCAC----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTGGCGCCAC-
TTTGGCGCCAAA
 A C G T A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

CRE(bZIP)/Promoter/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTGGCGCCAC
CGGTGACGTCAC
 A C G T A C G T A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGGCGCCAC---
TTGGGGGCGCCCCTAG
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGGCGCCAC--
GTGGCGTGACNG
 A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGGCGCCAC--
RTGACGTCAYCN
 A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T
T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTGGCGCCAC---
ACGATGACGTCATCGA
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

E2F2/MA0864.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCGCCAC---
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

CREB1/MA0018.2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGGCGCCAC
-TGACGTCA-
 A C T G A C G T A C T G A C T G A G T C A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A A C G T