Information for 8-CCAAAGCCAATTT (Motif 12)

A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C T G A C T G
p-value:1e-8
log p-value:-1.922e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 32.0bp
Average Position of motif in Background55.6 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0094.1_Lhx4/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCAAAGCCAATTT-----
-CAAAGCTAATTAGNTTN
 A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PH0005.1_Barhl1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAAAGCCAATTT----
-AACAACCAATTAATTC
 A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAAAGCCAATTT----
-CAAAACCAATTAATTT
 A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCAAAGCCAATTT
-AAAAGTCAA---
 A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCAAAGCCAATTT
----TGCCAA---
 A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCAAAGCCAATTT----
-AAAAACCAATTAAGAA
 A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAAAGCCAATTT
NTCAAGGTCA----
 A C G T A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCAAAGCCAATTT-
TGCCAAAATAAACANN
 A C G T A C G T A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCAAAGCCAATTT-
----AGCCAATCGG
 A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCAAAGCCAATTT
--CGTGCCAAG--
 A G T C A G T C C G T A C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T