Information for 8-RGSCRCGCTG (Motif 11)

C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A G T C A C T G A G C T A C T G A T C G G A T C A G C T
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.802
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif217.8
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets44.2 +/- 26.5bp
Average Position of motif in Background53.4 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:RGSCRCGCTG
---CACGCA-
 C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:RGSCRCGCTG
-----NGCTN
 C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:forward strand
Alignment:RGSCRCGCTG---
---CCTGCTGAGH
 C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:RGSCRCGCTG
-GGCGCGCT-
 C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:RGSCRCGCTG-
-GGCACGCGTC
 C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Klf12/MA0742.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:RGSCRCGCTG-----
GACCACGCCCTTATT
 C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----RGSCRCGCTG-
ATAAAGGCGCGCGAT
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----RGSCRCGCTG-
ATAAGGGCGCGCGAT
 A C G T A C G T A C G T A C G T C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RGSCRCGCTG-----
TAAGCCACGCCCCCTTT
 A C G T A C G T C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

PB0095.1_Zfp161_1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RGSCRCGCTG----
TGGCGCGCGCGCCTGA
 A C G T A C G T C T G A C T A G A T G C A G T C T C G A A G T C A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A