| p-value: | 1e-5 |
| log p-value: | -1.227e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 0.41% |
| Number of Background Sequences with motif | 2.8 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 35.7 +/- 31.3bp |
| Average Position of motif in Background | 59.9 +/- 8.8bp |
| Strand Bias (log2 ratio + to - strand density) | 1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 1 |
| Score: | 0.61
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---ATCTATCTGA
GYCATCMATCAT- |
|
|
|
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer
| Match Rank: | 2 |
| Score: | 0.60
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----ATCTATCTGA
HNRAATCAAT---- |
|
|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 3 |
| Score: | 0.59
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --ATCTATCTGA
TCATCAATCA-- |
|
|
|
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer
| Match Rank: | 4 |
| Score: | 0.59
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --ATCTATCTGA
NTATYGATCH-- |
|
|
|
CUX1/MA0754.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --ATCTATCTGA
TAATCGATAA-- |
|
|
|
PBX1/MA0070.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --ATCTATCTGA
CCATCAATCAAA |
|
|
|
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 7 |
| Score: | 0.57
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----ATCTATCTGA
RGCCATYAATCA-- |
|
|
|
CUX2/MA0755.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.57
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --ATCTATCTGA
TAATCGATAA-- |
|
|
|
PB0163.1_Six6_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.56
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------ATCTATCTGA-
ANNNGGATATATCCNNN |
|
|
|
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | ATCTATCTGA
YSTTATCT-- |
|
|
|
