Information for 17-AATAAAACTGTCA (Motif 31)

G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
Reverse Opposite:
A C G T C T A G C T G A G T A C C G T A A C T G A C G T A C G T A C G T A G C T G T C A A G C T A C G T
p-value:1e-10
log p-value:-2.340e+01
Information Content per bp:1.817
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 13.0bp
Average Position of motif in Background38.3 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAACTGTCA
CTACCAATAAAATTCT--
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AATAAAACTGTCA
CCAATAAAAA-----
 A C G T A C G T G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----AATAAAACTGTCA
AATGCAATAAAATTTAT-
 A C G T A C G T A C G T A C G T A C G T G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AATAAAACTGTCA
NCYAATAAAA------
 A C G T A C G T A C G T G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AATAAAACTGTCA
---CCAACTGCCA
 G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

HOXA13/MA0650.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATAAAACTGTCA
CCAATAAAAA-----
 A C G T A C G T G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATAAAACTGTCA
CCAATAAAAC-----
 A C G T A C G T G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T A C G T A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AATAAAACTGTCA
GGTAATAAAAA-----
 A C G T A C G T A C G T G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATAAAACTGTCA
GTCATAAAAN-----
 A C G T A C G T G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATAAAACTGTCA
GCAATAAAA------
 A C G T A C G T G T C A C T G A A C G T C T G A C G T A C G T A C G T A G T A C A C G T A C T G A G C T A G T C C G T A
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T