Information for 17-ACACAGACAGACTSCA (Motif 24)

C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
Reverse Opposite:
G C A T C A T G T A C G C G T A A C T G C A G T G A T C A G C T C T A G A C G T G T A C A C G T A C T G C A G T A T C G G A C T
p-value:1e-11
log p-value:-2.619e+01
Information Content per bp:1.673
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif31.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets49.1 +/- 24.0bp
Average Position of motif in Background46.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACACAGACAGACTSCA
--CCAGACAG------
 C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACACAGACAGACTSCA
--BCAGACWA------
 C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACACAGACAGACTSCA
--CCAGACRSVB----
 C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACACAGACAGACTSCA
CAAATCCAGACATCACA--
 A C G T A C G T A C G T C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:ACACAGACAGACTSCA
-CACAGN---------
 C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ACACAGACAGACTSCA
AGGTGNCAGACAG------
 A C G T A C G T A C G T C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-ACACAGACAGACTSCA
TGCCCAGNHW-------
 A C G T C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:ACACAGACAGACTSCA----
--WNAGTCADAVTGAAACTN
 C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:ACACAGACAGACTSCA
---ATGCCAGACN---
 C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---ACACAGACAGACTSCA
AGGTGHCAGACA-------
 A C G T A C G T A C G T C T G A A T G C G T C A G T A C G T C A A C T G T G C A G A T C C T G A C T A G G T C A T A G C C G A T A T G C G T A C C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T