Information for 14-AAGCCTGCAGSMWWAB (Motif 19)

T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T
Reverse Opposite:
T C G A A C G T C G A T G C T A A C T G A T C G G T A C A G C T A T C G A G T C C G T A A C T G A C T G G T A C A C G T A C G T
p-value:1e-12
log p-value:-2.890e+01
Information Content per bp:1.696
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif24.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets46.8 +/- 17.5bp
Average Position of motif in Background46.6 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGCCTGCAGSMWWAB
ATTGCCTGAGGCAAT--
 A C G T T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGCCTGCAGSMWWAB
-TGCCTGAGGCN----
 T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGCCTGCAGSMWWAB
-NGCCTGAGGCN----
 T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAGCCTGCAGSMWWAB
--SCCTSAGGSCAW--
 T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGCCTGCAGSMWWAB
-NGCCTNAGGCN----
 T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T
A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGCCTGCAGSMWWAB-----
-NNCCTGNAAAAAAAAAAAAA
 T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGCCTGCAGSMWWAB
SNGCACCTGCHS------
 A C G T A C G T T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGCCTGCAGSMWWAB-----
-NNCCTGNAAAAAAAAAAAAA
 T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGCCTGCAGSMWWAB
ATTCCCTGAGGGGAA--
 A C G T T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGCCTGCAGSMWWAB
ATTGCCTGAGGCGAA--
 A C G T T C G A T G C A C A T G A G T C A G T C A C G T A C T G A T G C C T G A A C T G A T G C T G A C C G A T G C T A G T C A A G C T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T A C G T