Information for 13-TCAGCTATACAGA (Motif 18)

C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A
Reverse Opposite:
A C G T A T G C A C G T A C T G A C G T G T C A A C G T C T G A A C T G A T G C A C G T A C T G C G T A
p-value:1e-12
log p-value:-2.902e+01
Information Content per bp:1.856
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.1 +/- 24.0bp
Average Position of motif in Background57.6 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCAGCTATACAGA
-AAGCCATAAAA-
 C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A
A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCAGCTATACAGA--
---GCTATAAATAGC
 C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A A C G T A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCAGCTATACAGA--
---TCTAAAAATAGA
 C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A A C G T A C G T
A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCAGCTATACAGA--
---ACTATAAATAGA
 C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A A C G T A C G T
A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCAGCTATACAGA--
---GCTAAAAATAGC
 C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A A C G T A C G T
A C G T A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TCAGCTATACAGA------
----GTATAAAAGGCGGGG
 C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TCAGCTATACAGA------
----GTATAAAAGGCGGGG
 C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCAGCTATACAGA---
CAAATCCAGACATCACA
 A C G T C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCAGCTATACAGA
---CCAATAAAAA
 C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCAGCTATACAGA
---GCAATAAAA-
 C G A T A G T C C G T A A T C G A G T C A G C T C G T A A C G T C G T A G T A C C G T A A T C G C G T A
A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T