Information for 10-GTTAASCCTTTGG (Motif 13)

A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
Reverse Opposite:
T G A C G A T C T G C A G T C A C T G A A C T G A C T G T A C G A C G T C G A T C G T A C G T A T G A C
p-value:1e-13
log p-value:-3.193e+01
Information Content per bp:1.746
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets47.5 +/- 19.6bp
Average Position of motif in Background54.1 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTTAASCCTTTGG
NYTAATCCYB---
 A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTTAASCCTTTGG-
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTTAASCCTTTGG
--TAATCCCN---
 A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTTAASCCTTTGG
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C G T A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTTAASCCTTTGG
AATCGTTAATCCCTTTA
 A C G T A C G T A C G T A C G T A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTTAASCCTTTGG
GATAATTAATCCCTCTT
 A C G T A C G T A C G T A C G T A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTTAASCCTTTGG
-TTAATCCT----
 A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTTAASCCTTTGG
-TTAATCCC----
 A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTTAASCCTTTGG
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTAASCCTTTGG
CTTAATCCC----
 A C T G A C G T G A C T C G T A G T C A A T G C A G T C A G T C A G C T A C G T A C G T C T A G A C T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T