Information for 9-GGAGYCTGKTTGGAGC (Motif 11)

A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C
Reverse Opposite:
C T A G G T A C C G A T G T A C A G T C C G T A C T G A G T A C A G T C G T C A A C T G C T G A A T G C A C G T A G T C G T A C
p-value:1e-15
log p-value:-3.531e+01
Information Content per bp:1.775
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 19.7bp
Average Position of motif in Background67.0 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGAGYCTGKTTGGAGC
GGNGCGNCTGTTNNN---
 A C G T A C G T A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGAGYCTGKTTGGAGC
NTNNNAGGAGTCTCNTN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGYCTGKTTGGAGC-
AGAGTGCTGATTGGTCCA
 A C G T A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGAGYCTGKTTGGAGC--
-NNTNNTGTCTGGNNTNG
 A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NFYB/MA0502.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GGAGYCTGKTTGGAGC----
-----CTGATTGGTCNATTT
 A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGAGYCTGKTTGGAGC
-----CTGTCTGG---
 A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGAGYCTGKTTGGAGC
-----TTGATTGN---
 A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GGAGYCTGKTTGGAGC
-----TWGTCTGV---
 A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGAGYCTGKTTGGAGC
---VBSYGTCTGG---
 A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GGAGYCTGKTTGGAGC
----CGTGGGTGGTCC
 A C T G T A C G G T C A A T C G A G C T G T A C A C G T A C T G A C T G A G C T A C G T C T A G A C T G C G T A C A T G G A T C
A C G T A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C