Information for 6-CAGCWTCCAGGACACT (Motif 8)

A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T
Reverse Opposite:
C G T A A C T G C G A T A T C G C G A T A T G C G A T C C G A T C T A G C T A G G T C A C G T A C A T G A G T C A C G T A T C G
p-value:1e-14
log p-value:-3.285e+01
Information Content per bp:1.721
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.4 +/- 27.9bp
Average Position of motif in Background18.6 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGCWTCCAGGACACT--
---TTTCCTGGAAAGNNN
 A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T A C G T A C G T
A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CAGCWTCCAGGACACT
---TTTCCNGGAAAN-
 A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T
A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C A C G T

REST/MA0138.2/Jaspar

Match Rank:3
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CAGCWTCCAGGACACT---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CAGCWTCCAGGACACT---
---------AASCACTCAA
 A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CAGCWTCCAGGACACT---
TCAGCACCATGGACAGCTCC
 A C G T A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAGCWTCCAGGACACT
-KGTTGCTAGGMAACA
 A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T
A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.49
Offset:10
Orientation:forward strand
Alignment:CAGCWTCCAGGACACT----
----------RSCACTYRAG
 A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CAGCWTCCAGGACACT
---TTTCCTGGAAA--
 A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T
A C G T A C G T A C G T G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.48
Offset:10
Orientation:reverse strand
Alignment:CAGCWTCCAGGACACT---
----------GACAATGNN
 A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:CAGCWTCCAGGACACT---
---------MRSCACTYAA
 A T G C G T C A C T A G G T A C G C A T A C G T G A T C A G T C G C T A C T A G A T C G C G T A A T G C C G T A G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A