Information for 25-CACAACAAAAACA (Motif 41)

G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A
Reverse Opposite:
A C G T A C T G C A G T A C G T C G A T A C G T A C G T A C T G G C A T C G A T A C T G A G C T A C T G
p-value:1e-4
log p-value:-9.272e+00
Information Content per bp:1.698
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif677.3
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets48.7 +/- 20.3bp
Average Position of motif in Background47.9 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CACAACAAAAACA---
-CAAACAACAACACCT
 G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CACAACAAAAACA
ATATCAAAACAAAACA-
 A C G T A C G T A C G T A C G T G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CACAACAAAAACA---
GTTAAAAAAAAAAATTA
 A C G T G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CACAACAAAAACA
NTTNAGAACAATTA--
 A C G T A C G T A C G T G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CACAACAAAAACA
ATGTCACAACAACAC--
 A C G T A C G T A C G T A C G T G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACAACAAAAACA--
AACAAACAACAAGAG
 G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CACAACAAAAACA
AAATAAGAAAAAAC
 A C G T G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACAACAAAAACA---
GTTCAAAAAAAAAATTC
 A C G T G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CACAACAAAAACA
---AACAAT----
 G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACAACAAAAACA-
TACTGGAAAAAAAA
 G T A C T C G A T G A C C G T A C G T A T G A C T G C A G T C A C G T A G T C A G T C A T G A C G T C A A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A