Information for 21-GCTTAAGTAG (Motif 40)

A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A G T C
p-value:1e-5
log p-value:-1.222e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.7 +/- 25.6bp
Average Position of motif in Background79.8 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAAGTAG-----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

LBX1/MA0618.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:GCTTAAGTAG
--TTAATTAG
 A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G
A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCTTAAGTAG-
--TTAAGTGGT
 A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAAGTAG-----
NTNNTTAAGTGGTTANN
 A C G T A C G T A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCTTAAGTAG-
--TTAAGTGGN
 A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G A C G T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAAGTAG-----
NNNTTAGGTAGCNTNT
 A C G T A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

mix-a/MA0621.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCTTAAGTAG-
AATTAATTAGT
 A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G A C G T
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0175.1_Vax2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTTAAGTAG-----
GNCTTAATTAGTGNNN
 A C G T A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C

LHX2/MA0700.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCTTAAGTAG-
-NNTAATTAGN
 A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G A C G T
A C G T T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCTTAAGTAG----
AATNTTAAGTGGNTNN
 A C G T A C G T A C T G A G T C A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A