Information for 4-CTGKTTTTTCTCA (Motif 4)

A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A
Reverse Opposite:
C G A T A C T G C G T A A C T G G T C A C G T A C T G A C T G A T C G A T G A C A G T C C G T A A C T G
p-value:1e-27
log p-value:-6.412e+01
Information Content per bp:1.739
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif5.07%
Number of Background Sequences with motif197.5
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets43.6 +/- 24.6bp
Average Position of motif in Background50.7 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--CTGKTTTTTCTCA
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGKTTTTTCTCA
GCTGTG--------
 A C G T A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGKTTTTTCTCA-
ACATCTGGWWTYAATTAR
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

GATA2/MA0036.2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGKTTTTTCTCA--
-AGATTCTTATCTGT
 A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A A C G T A C G T
A C G T C G T A C T A G C T G A G C A T A G C T A T G C A G C T C G A T C G T A A C G T A G T C C G A T A T C G G C A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTGKTTTTTCTCA
GGTCTGGCAT------
 A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTGKTTTTTCTCA
-----TCTTATCT
 A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A G C T A G T C C G A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTGKTTTTTCTCA
-----YSTTATCT
 A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTGKTTTTTCTCA--
-----YCTTATCWVN
 A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A C G T A G T C C G A T T A C G A T G C

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGKTTTTTCTCA-
NNAGATNVNWATCTN
 A C G T A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTGKTTTTTCTCA--
-----YCTTATCTBN
 A G T C A C G T A C T G A C T G A G C T A G C T G A C T G C A T A C G T T G A C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C