Information for 18-CATTAGTMAC (Motif 36)

A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C
Reverse Opposite:
A T C G A C G T A C G T C G T A A G T C A C G T C G T A C G T A C G A T A C T G
p-value:1e-7
log p-value:-1.788e+01
Information Content per bp:1.908
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.7 +/- 24.2bp
Average Position of motif in Background45.7 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CATTAGTMAC---
NNAATTAGTCACGGT
 A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C A C G T A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CATTAGTMAC-
-ACTAGTTAAC
 A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATTAGTMAC
RGCCATYAATCA-
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T

JUND/MA0491.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CATTAGTMAC-
NATGAGTCACN
 A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C A C G T
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATTAGTMAC
TCATCAATCA-
 A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATTAGTMAC-
NNATGASTCATH
 A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C A C G T
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CATTAGTMAC-
NATGAGTCACC
 A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C A C G T
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C

PH0150.1_Pou4f3/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CATTAGTMAC-
GACNTCATTAATAANN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CATTAGTMAC-
NATGAGTCANN
 A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C A C G T
T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CATTAGTMAC
ACTAATTAGC---
 A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C T G A C G T G T C A C G T A A T G C
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T