Information for 17-CCTGGCGCCA (Motif 35)

A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A
Reverse Opposite:
G C A T C T A G T A C G T G A C A C T G T A G C A T G C C G T A T C A G T A C G
p-value:1e-7
log p-value:-1.825e+01
Information Content per bp:1.661
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif374.7
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets55.0 +/- 23.9bp
Average Position of motif in Background50.4 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CCTGGCGCCA-----
AGCTCGGCGCCAAAAGC
 A C G T A C G T A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CCTGGCGCCA-----
CCTTCGGCGCCAAAAGG
 A C G T A C G T A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CCTGGCGCCA--
TTTGGCGCCAAA
 A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCTGGCGCCA--
---CGTGCCAAG
 A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCTGGCGCCA
-AGCGCGCC-
 A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCTGGCGCCA-
-----TGCCAA
 A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCTGGCGCCA
GRTGMTRGAGCC-
 A C G T A C G T A C G T A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T

E2F2/MA0864.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCTGGCGCCA----
AAAATGGCGCCATTTT
 A C G T A C G T A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

CREB1/MA0018.2/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTGGCGCCA
--TGACGTCA
 A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCTGGCGCCA---
-TTCGCGCGAAAA
 A T G C A G T C G A C T T A C G A T C G T G A C A C T G A T G C G A T C C G T A A C G T A C G T A C G T
A C G T A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A