Information for 22-CCCSGKGGCSTCM (Motif 30)

A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A A T G C A C T G A T G C A T G C G T C A A G T C A T G C A C T G A C T G A C T G
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 30.4bp
Average Position of motif in Background61.5 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCSGKGGCSTCM
TGCCCCCGGGCA---
 A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCCSGKGGCSTCM
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCCSGKGGCSTCM
CCCCCCCGGGGGGGT--
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCCSGKGGCSTCM
CCCCCCCGGGGGGGT--
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCSGKGGCSTCM
TGCCCCAGGGCA---
 A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCSGKGGCSTCM
TTGCCCTAGGGCAT--
 A C G T A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCSGKGGCSTCM
GTCCCCAGGGGA----
 A C G T A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCSGKGGCSTCM
CCCCCTTGGGCCCC-
 A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCCSGKGGCSTCM
CACCCCCGGGGGGG---
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCCSGKGGCSTCM
ATGCCCTGAGGC----
 A C G T A C G T A C G T A G T C A G T C A G T C A T C G A C T G A C G T A T C G A T C G A G T C A T C G A C G T A G T C G T A C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T