Information for 20-GGGAAATTTCCCA (Motif 28)

C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A
Reverse Opposite:
C G A T C T A G C T A G C A T G G C T A G C T A T C G A C G A T C G A T A C G T A G T C A G T C G A T C
p-value:1e-9
log p-value:-2.293e+01
Information Content per bp:1.671
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif268.5
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets56.7 +/- 27.1bp
Average Position of motif in Background50.2 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGAAATTTCCCA
-GGAAATTCCC--
 C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GGGAAATTTCCCA--
-----HTTTCCCASG
 C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGAAATTTCCCA
GGGAAATCCCCN-
 C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGAAATTTCCCA
-GGAAATTCCC--
 C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGGAAATTTCCCA--
-----ATTTTCCATT
 C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGGAAATTTCCCA--
-----ATTTTCCATT
 C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAATTTCCCA
AATGGAAAAT------
 A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAATTTCCCA
NNTGGAAANN------
 A C G T A C G T A C G T C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAATTTCCCA
TGGAAAA-------
 A C G T C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGGAAATTTCCCA
-GGAAATCCCC--
 C T A G C T A G T C A G C G T A C G T A G C T A A G C T C G A T C A G T G T A C A G T C G A T C G C T A
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T