Information for 20-GCCMCAGAYBAAAAGG (Motif 26)

A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G
Reverse Opposite:
A G T C G T A C A G C T C G A T A C G T C G A T T C A G T C G A A G C T A G T C A C G T A T C G C A T G A T C G T A C G G T A C
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.744
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.7 +/- 8.9bp
Average Position of motif in Background57.8 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1/MA0768.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCMCAGAYBAAAAGG--
---AAAGATCAAAGGGTT
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCMCAGAYBAAAAGG---
--NANAGATCAAAGGGNNN
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCCMCAGAYBAAAAGG---
----GAGGTCAAAAGGTCA
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCMCAGAYBAAAAGG---
---AAAGGTCAAAAGGTCA
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCCMCAGAYBAAAAGG
---AAAGATCAAAGG-
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G
A C G T A C G T A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T

Rarg/MA0859.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GCCMCAGAYBAAAAGG----
----AAGGTCAAAAGGTCAA
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCCMCAGAYBAAAAGG-
-----ACATCAAAGGNA
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCMCAGAYBAAAAGG---
--NNNAGATCAAAGGANNN
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

RARA/MA0729.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCCMCAGAYBAAAAGG------
----GAGGTCAAAAGGTCAATG
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCCMCAGAYBAAAAGG-
---AAAGATCAAAGGAA
 A C T G A T G C A T G C G T A C T A G C C G T A A C T G C T G A A G C T A G C T C G T A C G T A C G T A C T G A A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A