Information for 13-GGGTCTGGAA (Motif 18)

T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A
Reverse Opposite:
A C G T G A C T G T A C T A G C C G T A T C A G T C G A T A G C T A G C A T G C
p-value:1e-11
log p-value:-2.659e+01
Information Content per bp:1.524
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif292.0
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets45.0 +/- 26.3bp
Average Position of motif in Background52.3 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GGGTCTGGAA-
-GGTCTGGCAT
 T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGGTCTGGAA
VBSYGTCTGG--
 A C G T A C G T T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGGTCTGGAA
CTGTCTGG--
 T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GGGTCTGGAA---
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGTCTGGAA
TWGTCTGV--
 T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGTCTGGAA-
-WDNCTGGGCA
 T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A A C G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGGTCTGGAA--
BCNGGTTCTAGANCN
 A C G T A C G T A C G T T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGTCTGGAA---
-TGTCTGDCACCT
 T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGGTCTGGAA--
-----TGGAAAA
 T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGGTCTGGAA--
AGGTCTCTAACC
 T A C G A T C G A T C G A G C T A G T C G C A T A T C G C A T G C T G A T G C A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C