Information for 15-GGSTSYTAAAAKW (Motif 17)

A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T
Reverse Opposite:
C G T A G T A C A C G T A C G T A C G T A C G T C G T A C T G A A T C G C G T A T A C G A G T C A G T C
p-value:1e-11
log p-value:-2.662e+01
Information Content per bp:1.839
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets66.0 +/- 23.7bp
Average Position of motif in Background55.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa11/MA0911.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGSTSYTAAAAKW
-GGTCGTAAAATT
 A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T
A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGSTSYTAAAAKW
-GGTCGTAAAAA-
 A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T
A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGSTSYTAAAAKW
-GCTCGTAAAAA-
 A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGSTSYTAAAAKW-
AAAGCTCGTAAAATTT
 A C G T A C G T A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0012.1_Cdx1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGSTSYTAAAAKW-
TAAGGTAATAAAATTA
 A C G T A C G T A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0067.1_Hoxc12/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGSTSYTAAAAKW--
TTAGGTCGTAAAATTTC
 A C G T A C G T A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGSTSYTAAAAKW
-GGTCGTAAAAT-
 A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T
A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGSTSYTAAAAKW
-AGTCGTAAAAA-
 A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T
A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGSTSYTAAAAKW
--GTCGTAAAAT-
 A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T
A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGSTSYTAAAAKW-
AAACCTCGTAAAATTT
 A C G T A C G T A C T G A C T G A T G C A C G T T A G C G A C T A C G T C G T A C G T A C G T A C G T A C A T G C G A T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T