Information for 11-YCTAGACAGGAWGGAG (Motif 14)

A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
Reverse Opposite:
T A G C G A C T T A G C A G T C C G T A A C G T A G T C G T A C A C G T A C T G A G C T A G T C G A C T C T G A A C T G T C A G
p-value:1e-13
log p-value:-3.013e+01
Information Content per bp:1.699
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif59.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets56.2 +/- 18.8bp
Average Position of motif in Background50.6 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:YCTAGACAGGAWGGAG
----AACAGGAAGT--
 A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YCTAGACAGGAWGGAG
-CCAGACAG-------
 A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:YCTAGACAGGAWGGAG
--TTGACAGC------
 A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:YCTAGACAGGAWGGAG
----CACAGN------
 A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--YCTAGACAGGAWGGAG
CGTCTAGACA--------
 A C G T A C G T A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----YCTAGACAGGAWGGAG
CAAATCCAGACATCACA---
 A C G T A C G T A C G T A C G T A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:YCTAGACAGGAWGGAG
--TTGACAGG------
 A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:YCTAGACAGGAWGGAG
-----ACAGGAAGTG-
 A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:YCTAGACAGGAWGGAG
-CCAGACRSVB-----
 A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:YCTAGACAGGAWGGAG
--TTGACAG-------
 A G T C T G A C G A C T C T G A T A C G C T G A A G T C C G T A A C T G C T A G T G C A G C A T C T A G A T C G C T G A A C T G
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T