Information for 10-TGATDGATGGTTATTT (Motif 11)

A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
Reverse Opposite:
G T C A G T C A T C G A G A C T C T G A C T G A G A T C G T A C G T C A A C G T G T A C G A C T C G T A A C G T A T G C C G T A
p-value:1e-13
log p-value:-3.112e+01
Information Content per bp:1.706
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 18.9bp
Average Position of motif in Background45.8 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa9/MA0594.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGATDGATGGTTATTT
TGATTTATGGC-----
 A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGATDGATGGTTATTT
ATGATKGATGRC-----
 A C G T A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGATDGATGGTTATTT
TGATTGATGA------
 A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGATDGATGGTTATTT
TGATTRATGGCY----
 A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGATDGATGGTTATTT
TTTGATTGATGN------
 A C G T A C G T A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGATDGATGGTTATTT
TGATTTATGGCC----
 A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGATDGATGGTTATTT
TGATTTATGGCC----
 A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGATDGATGGTTATTT
NTGATTTATGGCC----
 A C G T A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGATDGATGGTTATTT---
----NTNTTGTTGTTTGTN
 A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TGATDGATGGTTATTT
NNNNNATTGATGNGTGN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A C G A T C T G A C A T G G T C A C A G T A C T G C T A G A G C T A G C T C G T A A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T A C G T A C G T A C G T A C G T A C G T