Information for 7-TCAACAGGGATCTGTA (Motif 7)

C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A
Reverse Opposite:
G A C T C G T A A T G C C G T A C T A G G T C A G A C T G T A C A G T C A G T C C G A T A C T G A C G T C G A T A C T G G C T A
p-value:1e-14
log p-value:-3.235e+01
Information Content per bp:1.730
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif12.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.6 +/- 24.9bp
Average Position of motif in Background50.8 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1/MA0743.1/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCAACAGGGATCTGTA
GAGCAACAGGTGGTT---
 A C G T A C G T C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCAACAGGGATCTGTA
CACAGCAGGGGG-----
 A C G T C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TCAACAGGGATCTGTA--
------GGGAATTGTAGT
 C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TCAACAGGGATCTGTA
DCHCAGCAGGRGGCC---
 A C G T A C G T C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCAACAGGGATCTGTA---
GCMTBCTGGGAGTTGTAGTY
 A C G T C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A A C G T A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCAACAGGGATCTGTA
-----AAGGATATNTN
 C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A
A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCAACAGGGATCTGTA
ATGCAACAGGTGG-----
 A C G T A C G T C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TCAACAGGGATCTGTA-
-CTACTAGGATGTNNTN
 C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A A C G T
A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCAACAGGGATCTGTA---
GCATTCTGGGAATTGTAGTT
 A C G T C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A A C G T A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TCAACAGGGATCTGTA
ATGTAAACADGS-------
 A C G T A C G T A C G T C G A T G T A C C G T A C G T A A G T C C G T A C T A G A C T G A C T G C G T A A C G T A G T C A C G T A T C G A C G T C T G A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T