Information for 23-AGCCCACTTCHAA (Motif 27)

G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A
Reverse Opposite:
A C G T A C G T C G T A T A C G C T G A C G T A A C T G A C G T A C T G A C T G A C T G T A G C A C G T
p-value:1e-7
log p-value:-1.726e+01
Information Content per bp:1.727
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif43.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets32.3 +/- 22.2bp
Average Position of motif in Background49.6 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGCCCACTTCHAA
--ACCACTTGAA-
 G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGCCCACTTCHAA
---CCACTTGAA-
 G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCCCACTTCHAA--
TAAGCCACTTGAAATT
 A C G T G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGCCCACTTCHAA--
TAAGCCACTTGAATTT
 A C G T G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCCCACTTCHAA---
ATAACCACTTGAAAATT
 A C G T G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCCCACTTCHAA--
TAAGCCACTTGAAATT
 A C G T G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGCCCACTTCHAA
--ACCACTTAA--
 G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGCCCACTTCHAA
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGCCCACTTCHAA
--ACCACTTAA--
 G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A
A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGCCCACTTCHAA
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T G T C A A C T G G T A C G T A C G T A C G T C A G T A C A C G T A G C T A T G C G C A T T C G A G T C A
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A