Information for 22-GGHACAAAACCAT (Motif 26)

C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T
Reverse Opposite:
G T C A A G C T A C T G A T C G G A C T A C G T G C A T A C G T A C T G A C G T C G A T G A T C A G T C
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.722
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.5 +/- 21.3bp
Average Position of motif in Background40.8 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGHACAAAACCAT
CCAGGAACAG------
 A C G T A C G T A C G T C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGHACAAAACCAT
CGAAGCACACAAAATA
 A C G T A C G T A C G T C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGHACAAAACCAT
AAAACAAAGG---
 C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGHACAAAACCAT
GGAACAAAGR---
 C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGHACAAAACCAT
RNAACAATGG---
 C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGHACAAAACCAT----
--AACAATAACATTGTT
 C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGHACAAAACCAT
VRRACAAWGG---
 C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGHACAAAACCAT-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGHACAAAACCAT
---ACAAAG----
 C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGHACAAAACCAT
--AACAAT-----
 C T A G C A T G G C T A C G T A A G T C C G T A C G T A T C G A C G T A A T G C G T A C C T G A A C G T
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T