Information for 13-CWCAGGCCACTGTGAG (Motif 23)

A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G
Reverse Opposite:
G T A C C G A T G T A C G T C A A T G C G T C A A C T G A C G T A C T G C T A G G T A C G A T C C G A T A T C G G C T A A T C G
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.728
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.9 +/- 21.4bp
Average Position of motif in Background51.7 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CWCAGGCCACTGTGAG-
--NAGGTCACNNTGACC
 A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G A C G T
A C G T A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR1/MA0112.3/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CWCAGGCCACTGTGAG---
--CAGGTCACCGTGACCTT
 A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G A C G T A C G T A C G T
A C G T A C G T T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CWCAGGCCACTGTGAG
--CAGGCCNNGGCCNN
 A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CWCAGGCCACTGTGAG--
---AGGNCANNGTGACCT
 A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G A C G T A C G T
A C G T A C G T A C G T C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.51
Offset:8
Orientation:forward strand
Alignment:CWCAGGCCACTGTGAG
--------GCTGTG--
 A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CWCAGGCCACTGTGAG
----AGCCAATCGG--
 A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CWCAGGCCACTGTGAG-
-------CCTGCTGAGH
 A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CWCAGGCCACTGTGAG
--AAGGTCAC------
 A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CWCAGGCCACTGTGAG
----GTCCCCAGGGGA
 A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G
A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CWCAGGCCACTGTGAG
CNGTCACGCCAC------
 A C G T A C G T A T G C C G A T A T G C G C T A C T A G A C T G A G T C A G T C G T C A A G T C A C G T A T C G C A G T A C T G C G T A C A T G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T