p-value: | 1e-10 |
log p-value: | -2.345e+01 |
Information Content per bp: | 1.889 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.85% |
Number of Background Sequences with motif | 4.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.2 +/- 28.9bp |
Average Position of motif in Background | 50.6 +/- 16.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0067.1_Sox18_1/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGTGTTTTAACT TTCAATTGTTCTAAAA |
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PB0062.1_Sox12_1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AAGTGTTTTAACT TAATTGTTCTAAAC |
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Sox5/MA0087.1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAGTGTTTTAACT -ATTGTTA----- |
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PB0066.1_Sox17_1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAGTGTTTTAACT NNATNAATTGTTTNN--- |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AAGTGTTTTAACT AANTTATTGTTCTNNA- |
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PB0141.1_Isgf3g_2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAGTGTTTTAACT NNGTANTGTTTTNC-- |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AAGTGTTTTAACT NNTTTATTGTTCTNNN- |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -8 |
Orientation: | reverse strand |
Alignment: | --------AAGTGTTTTAACT- TNNANNTCTATTGTTNTNNANN |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGTGTTTTAACT TTAAGTGCTT----- |
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Hoxd9/MA0913.1/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AAGTGTTTTAACT-- -----TTTTTATTGC |
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