Information for 10-AACCAGGCTC (Motif 12)

G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C
Reverse Opposite:
T A C G C T G A A T C G G A T C A G T C C G A T C T A G A C T G G C A T C G A T
p-value:1e-13
log p-value:-3.115e+01
Information Content per bp:1.663
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif6.94%
Number of Background Sequences with motif888.6
Percentage of Background Sequences with motif1.91%
Average Position of motif in Targets50.5 +/- 28.8bp
Average Position of motif in Background51.8 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AACCAGGCTC
NNNGTAACTANGNNA
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACCAGGCTC---
AGCAACAGCCGCACC
 A C G T A C G T G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AACCAGGCTC
GTTAACTAGN---
 A C G T A C G T A C G T G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AACCAGGCTC-
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AACCAGGCTC
--BCAGACWA
 G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACCAGGCTC
ATGCCAGACN-
 A C G T G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AACCAGGCTC
--CCAGACAG
 G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AACCAGGCTC----
CAAATCCAGACATCACA
 A C G T A C G T A C G T G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AACCAGGCTC------------
--YCAGGCWCAGTACCAGGCTC
 G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AACCAGGCTC--
--CCAGACRSVB
 G C T A C G T A T G A C G A T C C G T A T C A G C T A G T A G C G A C T A T G C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C