Information for 9-ATCTCCAGACCMTTGM (Motif 10)

C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
Reverse Opposite:
C A G T A T G C C G T A C T G A A C G T A C T G A T C G A C G T A G T C C G A T A C T G A C T G C G T A C T A G C G T A A C G T
p-value:1e-13
log p-value:-3.173e+01
Information Content per bp:1.765
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.3 +/- 20.4bp
Average Position of motif in Background24.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATCTCCAGACCMTTGM
-ATGCCAGACN-----
 C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATCTCCAGACCMTTGM
CAAATCCAGACATCACA
 A C G T C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ATCTCCAGACCMTTGM
----CCAGACAG----
 C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATCTCCAGACCMTTGM
ATTTGCATA-------
 C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ATCTCCAGACCMTTGM
----CCAGACRSVB--
 C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATCTCCAGACCMTTGM
--TTCTAGAACGTTC-
 C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
A C G T A C G T C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ATCTCCAGACCMTTGM-
--TTCTAGAABNTTCTA
 C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C A C G T
A C G T A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF1/MA0486.2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ATCTCCAGACCMTTGM
--TTCTAGAACGTTC-
 C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
A C G T A C G T C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATCTCCAGACCMTTGM
ATTTCCTGTN------
 C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATCTCCAGACCMTTGM
ATTTGCATA-------
 C G T A A C G T A G T C C G A T T A G C A G T C C G T A A C T G C G T A A T G C G T A C T G A C A G C T A C G T A T C G G T A C
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T