Information for 13-RTACAGCAAAGGATTA (Motif 25)

C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A
Reverse Opposite:
C G A T C G T A C G T A A C G T A T G C A G T C A C G T A G C T A C G T A C T G G T A C C G A T C A T G G A C T C T G A A G T C
p-value:1e-8
log p-value:-2.013e+01
Information Content per bp:1.741
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.2 +/- 13.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0082.1_Tcf3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-RTACAGCAAAGGATTA
TATAGATCAAAGGAAAA
 A C G T C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-RTACAGCAAAGGATTA
TATAGATCAAAGGAAAA
 A C G T C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-RTACAGCAAAGGATTA
NNNAGATCAAAGGANNN
 A C G T C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RTACAGCAAAGGATTA
NANAGATCAAAGGGNNN
 A C G T C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:RTACAGCAAAGGATTA-----
----TGAACCGGATTAATGAA
 C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:RTACAGCAAAGGATTA-----
----TGAACCGGATTAATGAA
 C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:RTACAGCAAAGGATTA
--ACWTCAAAGG----
 C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:RTACAGCAAAGGATTA--
--------VRGGATTARN
 C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0126.1_Obox6/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:RTACAGCAAAGGATTA---
----AAAAACGGATTATTG
 C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:forward strand
Alignment:RTACAGCAAAGGATTA-
------AAGAGGATTAG
 C T A G G A C T C T G A G T A C G C T A C A T G T G A C C G T A C T G A C G T A C T A G A T C G C G T A A C G T G A C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G