Information for 12-AGATGCAGCTGYCCTG (Motif 19)

C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
Reverse Opposite:
A G T C G C T A A C T G A C T G C T A G A T G C C G T A A C T G G T A C C G A T A C T G A G T C C G T A A C G T A G T C C G A T
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.7 +/- 22.2bp
Average Position of motif in Background44.7 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGATGCAGCTGYCCTG
--NNGCAGCTGTC---
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGATGCAGCTGYCCTG
AGATGCTRCTRCCHT-
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGATGCAGCTGYCCTG
--NNGCAGCTGTT---
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGATGCAGCTGYCCTG
---TGCAGCTGTCCCT
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGATGCAGCTGYCCTG
----GCAGCTGTNN--
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGATGCAGCTGYCCTG
-NNAGCAGCTGCT---
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGATGCAGCTGYCCTG
---NVCAGCTGBBNN-
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGATGCAGCTGYCCTG
--SDGCAGGTGCNS--
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:9
Orientation:reverse strand
Alignment:AGATGCAGCTGYCCTG---
---------TGCCCAGNHW
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGATGCAGCTGYCCTG
--CAGCAGCTGN----
 C G T A T A C G G T C A C G A T A C T G A G T C C G T A A C T G T A G C A C G T A T C G A G T C A G T C A G T C C A G T A C T G
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T