p-value: | 1e-35 |
log p-value: | -8.089e+01 |
Information Content per bp: | 1.671 |
Number of Target Sequences with motif | 38.0 |
Percentage of Target Sequences with motif | 4.39% |
Number of Background Sequences with motif | 105.4 |
Percentage of Background Sequences with motif | 0.22% |
Average Position of motif in Targets | 49.5 +/- 24.5bp |
Average Position of motif in Background | 48.7 +/- 29.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 1 |
Score: | 0.91 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTGTYATGCWAAT CATTGTTATGCAAAT |
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Pou5f1::Sox2/MA0142.1/Jaspar
Match Rank: | 2 |
Score: | 0.91 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TTGTYATGCWAAT CTTTGTTATGCAAAT |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 3 |
Score: | 0.78 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTGTYATGCWAAT--- ----TATGCWAATBAV |
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Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
Match Rank: | 4 |
Score: | 0.77 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTGTYATGCWAAT ---TTATGCAAAT |
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POU3F1/MA0786.1/Jaspar
Match Rank: | 5 |
Score: | 0.77 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTGTYATGCWAAT-- ---TTATGCAAATTA |
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POU3F2/MA0787.1/Jaspar
Match Rank: | 6 |
Score: | 0.76 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTGTYATGCWAAT-- ---TTATGCAAATTA |
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Pou2f3/MA0627.1/Jaspar
Match Rank: | 7 |
Score: | 0.76 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTGTYATGCWAAT---- -TTGTATGCAAATTAGA |
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PH0145.1_Pou2f3/Jaspar
Match Rank: | 8 |
Score: | 0.76 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTGTYATGCWAAT---- -TTGTATGCAAATTAGA |
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Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 9 |
Score: | 0.76 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTGTYATGCWAAT--- ----WATGCAAATGAG |
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POU5F1B/MA0792.1/Jaspar
Match Rank: | 10 |
Score: | 0.75 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTGTYATGCWAAT ----TATGCAAAT |
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